IL_7V2Q_052

3D structure

PDB id

7V2Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K6

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

AGG*CCCU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7V2Q_052 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.3168

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49140.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7V2Q|1|A|A|979
7V2Q|1|A|G|980
7V2Q|1|A|G|981
*
7V2Q|1|A|C|1020
7V2Q|1|A|C|1021
7V2Q|1|A|C|1022
7V2Q|1|A|U|1023

Current chains

Chain A

16s ribosomal RNA

Nearby chains