IL_7WTL_026

3D structure

PDB id

7WTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AU*AAU

Length

5 nucleotides

Bulged bases

7WTL|1|C2|A|506

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7WTL_026 not in the Motif Atlas

Geometric match to IL_4WF9_002

Geometric discrepancy: 0.2149

The information below is about IL_4WF9_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7WTL|1|C2|A|481
7WTL|1|C2|U|482
*
7WTL|1|C2|A|505
7WTL|1|C2|A|506
7WTL|1|C2|U|507

Current chains

Chain C2

18S rRNA

Nearby chains

Chain UC

Something about silencing protein 10