IL_7WTL_027
3D structure
- PDB id
- 7WTL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAG*CGAGGAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTL_027 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.181
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7WTL|1|C2|G|514
7WTL|1|C2|A|515
7WTL|1|C2|G|516
*
7WTL|1|C2|C|536
7WTL|1|C2|G|537
7WTL|1|C2|A|538
7WTL|1|C2|G|539
7WTL|1|C2|G|540
7WTL|1|C2|A|541
7WTL|1|C2|A|542
7WTL|1|C2|C|543
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain CL
- Ribosome biogenesis protein BMS1
- Chain SJ
- 40S ribosomal protein S9-A
- Chain UC
- Something about silencing protein 10
Coloring options: