IL_7WTQ_027
3D structure
- PDB id
- 7WTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (without Rps2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AU*AAU
- Length
- 5 nucleotides
- Bulged bases
- 7WTQ|1|C2|A|506
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTQ_027 not in the Motif Atlas
- Geometric match to IL_5J7L_246
- Geometric discrepancy: 0.1797
- The information below is about IL_5J7L_246
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
7WTQ|1|C2|A|481
7WTQ|1|C2|U|482
*
7WTQ|1|C2|A|505
7WTQ|1|C2|A|506
7WTQ|1|C2|U|507
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SJ
- 40S ribosomal protein S9-A
- Chain Se
- 40S ribosomal protein S30-A
Coloring options: