IL_7WTQ_034

3D structure

PDB id

7WTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (without Rps2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UG*UAA

Length

5 nucleotides

Bulged bases

7WTQ|1|C2|A|579

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTQ|1|C2|U|563
7WTQ|1|C2|G|564
*
7WTQ|1|C2|U|578
7WTQ|1|C2|A|579
7WTQ|1|C2|A|580

Current chains

Chain C2

18S rRNA

Nearby chains

Chain CB

18S rRNA (guanine(1575)-N(7))-methyltransferase

Chain SX

40S ribosomal protein S23-A