IL_7WTS_060

3D structure

PDB id

7WTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUAAUUUGC*GCUG

Length

14 nucleotides

Bulged bases

7WTS|1|2|A|1240, 7WTS|1|2|U|1519

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTS|1|2|C|1237
7WTS|1|2|U|1238
7WTS|1|2|U|1239
7WTS|1|2|A|1240
7WTS|1|2|A|1241
7WTS|1|2|U|1242
7WTS|1|2|U|1243
7WTS|1|2|U|1244
7WTS|1|2|G|1245
7WTS|1|2|C|1264
*
7WTS|1|2|G|1517
7WTS|1|2|C|1518
7WTS|1|2|U|1519
7WTS|1|2|G|1520

Current chains

Chain 2

18S rRNA

Nearby chains

Chain q

Probable 18S rRNA (guanine-N(7))-methyltransferase