IL_7WTT_030
3D structure
- PDB id
- 7WTT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTT_030 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1443
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7WTT|1|2|G|563
7WTT|1|2|A|564
7WTT|1|2|G|565
*
7WTT|1|2|C|585
7WTT|1|2|G|586
7WTT|1|2|A|587
7WTT|1|2|G|588
7WTT|1|2|G|589
7WTT|1|2|A|590
7WTT|1|2|U|591
7WTT|1|2|C|592
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain J
- 40S ribosomal protein S9
- Chain e
- 40S ribosomal protein S30
- Chain u
- Pre-rRNA-processing protein TSR1 homolog
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