IL_7WTT_061

3D structure

PDB id

7WTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAAUUUGC*GCUG

Length

14 nucleotides

Bulged bases

7WTT|1|2|U|1519

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTT|1|2|C|1237
7WTT|1|2|U|1238
7WTT|1|2|U|1239
7WTT|1|2|A|1240
7WTT|1|2|A|1241
7WTT|1|2|U|1242
7WTT|1|2|U|1243
7WTT|1|2|U|1244
7WTT|1|2|G|1245
7WTT|1|2|C|1264
*
7WTT|1|2|G|1517
7WTT|1|2|C|1518
7WTT|1|2|U|1519
7WTT|1|2|G|1520

Current chains

Chain 2

18S rRNA

Nearby chains

Chain K

RRP12-like protein

Chain P

40S ribosomal protein S15

Chain S

40S ribosomal protein S18

Chain u

Pre-rRNA-processing protein TSR1 homolog