IL_7WTW_064

3D structure

PDB id

7WTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AC*GGGU

Length

6 nucleotides

Bulged bases

7WTW|1|2|G|1321

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7WTW_064 not in the Motif Atlas

Geometric match to IL_8P9A_328

Geometric discrepancy: 0.374

The information below is about IL_8P9A_328

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90176.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

7WTW|1|2|A|1276
7WTW|1|2|C|1277
*
7WTW|1|2|G|1320
7WTW|1|2|G|1321
7WTW|1|2|G|1322
7WTW|1|2|U|1323

Current chains

Chain 2

18S rRNA

Nearby chains

Chain M

40S ribosomal protein S12

Chain u

Pre-rRNA-processing protein TSR1 homolog

Chain w

Bystin