IL_7WTX_043
3D structure
- PDB id
- 7WTX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTX_043 not in the Motif Atlas
- Geometric match to IL_4P43_004
- Geometric discrepancy: 0.1409
- The information below is about IL_4P43_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7WTX|1|2|U|805
7WTX|1|2|U|806
7WTX|1|2|G|807
*
7WTX|1|2|C|856
7WTX|1|2|U|857
7WTX|1|2|A|858
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain H
- 40S ribosomal protein S7
- Chain L
- 40S ribosomal protein S11
- Chain W
- 40S ribosomal protein S15a
Coloring options: