IL_7WTZ_096

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCUCAGCGUG*CCGUUGAACCC

Length

21 nucleotides

Bulged bases

7WTZ|1|2|U|1585, 7WTZ|1|2|G|1587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTZ|1|2|G|1541
7WTZ|1|2|C|1542
7WTZ|1|2|U|1543
7WTZ|1|2|C|1544
7WTZ|1|2|A|1545
7WTZ|1|2|G|1546
7WTZ|1|2|C|1547
7WTZ|1|2|G|1548
7WTZ|1|2|U|1549
7WTZ|1|2|G|1550
*
7WTZ|1|2|C|1582
7WTZ|1|2|C|1583
7WTZ|1|2|G|1584
7WTZ|1|2|U|1585
7WTZ|1|2|U|1586
7WTZ|1|2|G|1587
7WTZ|1|2|A|1588
7WTZ|1|2|A|1589
7WTZ|1|2|C|1590
7WTZ|1|2|C|1591
7WTZ|1|2|C|1592

Current chains

Chain 2

18S rRNA

Nearby chains

Chain F

40S ribosomal protein S5

Chain K

RRP12-like protein

Chain Q

40S ribosomal protein S16

Chain T

40S ribosomal protein S19

Chain Z

40S ribosomal protein S25