IL_7XAM_087

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUAGGAUAGGUG*CACUC

Length

19 nucleotides

Bulged bases

7XAM|1|A|U|2334, 7XAM|1|A|G|2335, 7XAM|1|A|G|2339, 7XAM|1|A|U|2341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XAM|1|A|G|2333
7XAM|1|A|U|2334
7XAM|1|A|G|2335
7XAM|1|A|U|2336
7XAM|1|A|A|2337
7XAM|1|A|G|2338
7XAM|1|A|G|2339
7XAM|1|A|A|2340
7XAM|1|A|U|2341
7XAM|1|A|A|2342
7XAM|1|A|G|2343
7XAM|1|A|G|2344
7XAM|1|A|U|2345
7XAM|1|A|G|2346
*
7XAM|1|A|C|2398
7XAM|1|A|A|2399
7XAM|1|A|C|2400
7XAM|1|A|U|2401
7XAM|1|A|C|2402

Current chains

Chain A

23S rRNA

Nearby chains