IL_7Y41_047

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

7Y41|1|A|A|1206

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y41_047 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.2686

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Y41|1|A|G|1205
7Y41|1|A|A|1206
7Y41|1|A|G|1207
7Y41|1|A|U|1208
7Y41|1|A|G|1209
*
7Y41|1|A|C|1218
7Y41|1|A|U|1219
7Y41|1|A|C|1220

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L11

Chain f

50S ribosomal protein L36