IL_7Y41_110
3D structure
- PDB id
- 7Y41 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Y41_110 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.08
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
7Y41|1|A|C|2574
7Y41|1|A|G|2575
7Y41|1|A|A|2576
7Y41|1|A|G|2577
*
7Y41|1|A|C|2588
7Y41|1|A|G|2589
7Y41|1|A|A|2590
7Y41|1|A|G|2591
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain X
- 50S ribosomal protein L27
- Chain e
- 50S ribosomal protein L35
Coloring options: