IL_7Y41_115
3D structure
- PDB id
- 7Y41 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Y41_115 not in the Motif Atlas
- Geometric match to IL_7A0S_086
- Geometric discrepancy: 0.1313
- The information below is about IL_7A0S_086
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_36931.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
7Y41|1|A|A|2683
7Y41|1|A|U|2684
7Y41|1|A|C|2685
*
7Y41|1|A|G|2713
7Y41|1|A|G|2714
7Y41|1|A|U|2715
7Y41|1|A|U|2716
7Y41|1|A|U|2717
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal subunit bL37
- Chain N
- 50S ribosomal protein L16
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