IL_7Y7C_023

3D structure

PDB id

7Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

GUA*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7C_023 not in the Motif Atlas

Geometric match to IL_5TBW_079

Geometric discrepancy: 0.1457

The information below is about IL_5TBW_079

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7Y7C|1|A|G|457
7Y7C|1|A|U|458
7Y7C|1|A|A|459
*
7Y7C|1|A|U|473
7Y7C|1|A|G|474
7Y7C|1|A|C|475

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16