IL_7Y7C_096
3D structure
- PDB id
- 7Y7C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- GCAAG*CAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Y7C_096 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.2007
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7Y7C|1|a|G|875
7Y7C|1|a|C|876
7Y7C|1|a|A|877
7Y7C|1|a|A|878
7Y7C|1|a|G|879
*
7Y7C|1|a|C|898
7Y7C|1|a|A|899
7Y7C|1|a|A|900
7Y7C|1|a|C|901
7Y7C|1|a|C|902
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain V
- Transfer RNA; tRNA
- Chain l
- 50S ribosomal protein L16
Coloring options: