IL_7Y7D_181

3D structure

PDB id

7Y7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

7Y7D|1|a|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7D_181 not in the Motif Atlas

Geometric match to IL_8VTW_082

Geometric discrepancy: 0.2763

The information below is about IL_8VTW_082

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7Y7D|1|a|G|880
7Y7D|1|a|G|881
7Y7D|1|a|G|882
*
7Y7D|1|a|U|894
7Y7D|1|a|U|895
7Y7D|1|a|A|896
7Y7D|1|a|C|897

Current chains

Chain a

23S rRNA

Nearby chains

Chain V

Transfer RNA; tRNA