IL_7Y7E_017

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

7Y7E|1|A|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7E_017 not in the Motif Atlas

Homologous match to IL_5J7L_017

Geometric discrepancy: 0.1076

The information below is about IL_5J7L_017

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7Y7E|1|A|U|367
7Y7E|1|A|U|368
7Y7E|1|A|G|369
*
7Y7E|1|A|C|392
7Y7E|1|A|A|393

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16