IL_7Y7E_075

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7E_075 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3535

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7Y7E|1|a|C|274
7Y7E|1|a|C|275
7Y7E|1|a|U|276
7Y7E|1|a|G|277
7Y7E|1|a|A|278
7Y7E|1|a|A|279
7Y7E|1|a|U|280
7Y7E|1|a|C|281
*
7Y7E|1|a|G|359
7Y7E|1|a|U|360
7Y7E|1|a|G|361
7Y7E|1|a|A|362
7Y7E|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains