IL_7Y7G_176

3D structure

PDB id

7Y7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

AGAAU*GGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Y7G_176 not in the Motif Atlas

Homologous match to IL_4LFB_065

Geometric discrepancy: 0.0692

The information below is about IL_4LFB_065

Detailed Annotation

Triple non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_49751.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

7Y7G|1|A|A|673
7Y7G|1|A|G|674
7Y7G|1|A|A|675
7Y7G|1|A|A|676
7Y7G|1|A|U|677
*
7Y7G|1|A|G|713
7Y7G|1|A|G|714
7Y7G|1|A|A|715
7Y7G|1|A|A|716
7Y7G|1|A|U|717

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S6, fully modified isoform

Chain K

30S ribosomal protein S11

Chain R

30S ribosomal protein S18

Chain U

30S ribosomal protein S21

Chain c

50S ribosomal protein L2