IL_7YG8_011

3D structure

PDB id

7YG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Tetrahymena ribozyme conformation 5 undergoing the second-step self-splicing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAUGAA*UGGAGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7YG8|1|N|G|338
7YG8|1|N|A|339
7YG8|1|N|U|340
7YG8|1|N|G|341
7YG8|1|N|A|342
7YG8|1|N|A|343
*
7YG8|1|N|U|356
7YG8|1|N|G|357
7YG8|1|N|G|358
7YG8|1|N|A|359
7YG8|1|N|G|360
7YG8|1|N|C|361

Current chains

Chain N

RNA (387-MER)

Nearby chains