IL_7YLA_047

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_047 not in the Motif Atlas

Homologous match to IL_5J7L_293

Geometric discrepancy: 0.0759

The information below is about IL_5J7L_293

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7YLA|1|I|C|1357
7YLA|1|I|G|1358
7YLA|1|I|A|1359
7YLA|1|I|G|1360
7YLA|1|I|G|1361
*
7YLA|1|I|C|1370
7YLA|1|I|G|1371
7YLA|1|I|U|1372
7YLA|1|I|A|1373
7YLA|1|I|G|1374

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain K

50S ribosomal protein L2

Chain f

50S ribosomal protein L28

Chain k

50S ribosomal protein L34