IL_7YLA_049

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

7YLA|1|I|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_049 not in the Motif Atlas

Geometric match to IL_5J7L_295

Geometric discrepancy: 0.1306

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7YLA|1|I|C|1417
7YLA|1|I|G|1418
7YLA|1|I|A|1419
7YLA|1|I|A|1420
7YLA|1|I|G|1421
*
7YLA|1|I|C|1577
7YLA|1|I|U|1578
7YLA|1|I|A|1579
7YLA|1|I|A|1580
7YLA|1|I|G|1581

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains