IL_7YLA_062

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7YLA|1|I|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_062 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.0923

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7YLA|1|I|C|1686
7YLA|1|I|G|1687
7YLA|1|I|U|1688
7YLA|1|I|A|1689
7YLA|1|I|A|1690
7YLA|1|I|C|1691
*
7YLA|1|I|G|1696
7YLA|1|I|G|1697
7YLA|1|I|A|1698
7YLA|1|I|G|1699
7YLA|1|I|A|1700
7YLA|1|I|A|1701
7YLA|1|I|G|1702

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain K

50S ribosomal protein L2