IL_7YLA_077

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

7YLA|1|I|G|2238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_077 not in the Motif Atlas

Homologous match to IL_5J7L_325

Geometric discrepancy: 0.0908

The information below is about IL_5J7L_325

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

7YLA|1|I|U|2081
7YLA|1|I|A|2082
7YLA|1|I|G|2083
*
7YLA|1|I|U|2236
7YLA|1|I|G|2237
7YLA|1|I|G|2238
7YLA|1|I|G|2239

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain K

50S ribosomal protein L2

Chain f

50S ribosomal protein L28