IL_7YLA_106

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_106 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.0621

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7YLA|1|I|U|2847
7YLA|1|I|G|2848
7YLA|1|I|U|2849
7YLA|1|I|A|2850
7YLA|1|I|A|2851
7YLA|1|I|G|2852
*
7YLA|1|I|U|2865
7YLA|1|I|U|2866
7YLA|1|I|G|2867
7YLA|1|I|A|2868
7YLA|1|I|G|2869

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain V

50S ribosomal protein L17

Chain X

50S ribosomal protein L19