3D structure

PDB id
7YLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of 50S-HflX complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.52 Å

Loop

Sequence
GAGCCUUGAUG*CUUUAAUGUUU
Length
22 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7YLA|1|I|G|2100
7YLA|1|I|A|2101
7YLA|1|I|G|2102
7YLA|1|I|C|2103
7YLA|1|I|C|2104
7YLA|1|I|U|2105
7YLA|1|I|U|2106
7YLA|1|I|G|2107
7YLA|1|I|A|2108
7YLA|1|I|U|2109
7YLA|1|I|G|2110
*
7YLA|1|I|C|2179
7YLA|1|I|U|2180
7YLA|1|I|U|2181
7YLA|1|I|U|2182
7YLA|1|I|A|2183
7YLA|1|I|A|2184
7YLA|1|I|U|2185
7YLA|1|I|G|2186
7YLA|1|I|U|2187
7YLA|1|I|U|2188
7YLA|1|I|U|2189

Current chains

Chain I
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain P
50S ribosomal protein L9

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1005 s