IL_7YLA_124

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

7YLA|1|I|U|276

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7YLA_124 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2896

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7YLA|1|I|C|274
7YLA|1|I|C|275
7YLA|1|I|U|276
7YLA|1|I|G|277
7YLA|1|I|A|278
7YLA|1|I|A|279
7YLA|1|I|U|280
7YLA|1|I|C|281
*
7YLA|1|I|G|359
7YLA|1|I|U|360
7YLA|1|I|G|361
7YLA|1|I|A|362
7YLA|1|I|G|363

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains