IL_7Z3N_117

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UA*UAAG

Length

6 nucleotides

Bulged bases

7Z3N|1|1|A|2870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3N_117 not in the Motif Atlas

Homologous match to IL_8C3A_119

Geometric discrepancy: 0.1911

The information below is about IL_8C3A_119

Detailed Annotation

Major groove platform with intercalation

Broad Annotation

Major groove platform

Motif group

IL_95601.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

9

Unit IDs

7Z3N|1|1|U|2850
7Z3N|1|1|A|2851
*
7Z3N|1|1|U|2868
7Z3N|1|1|A|2869
7Z3N|1|1|A|2870
7Z3N|1|1|G|2871

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LH

uL6

Chain LO

60S ribosomal protein L16-like protein

Chain Lm

Putative ribosomal protein