IL_7Z3N_172

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CG*CUG

Length

5 nucleotides

Bulged bases

7Z3N|1|2|U|677

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3N_172 not in the Motif Atlas

Geometric match to IL_3TZR_002

Geometric discrepancy: 0.3831

The information below is about IL_3TZR_002

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7Z3N|1|2|C|648
7Z3N|1|2|G|649
*
7Z3N|1|2|C|676
7Z3N|1|2|U|677
7Z3N|1|2|G|678

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein s9-like protein