IL_7ZAH_082

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUUAG*(4AC)GAAGAUC

Length

14 nucleotides

Bulged bases

7ZAH|1|2|U|253, 7ZAH|1|2|A|289

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|G|251
7ZAH|1|2|A|252
7ZAH|1|2|U|253
7ZAH|1|2|U|254
7ZAH|1|2|A|255
7ZAH|1|2|G|256
*
7ZAH|1|2|4AC|286
7ZAH|1|2|G|287
7ZAH|1|2|A|288
7ZAH|1|2|A|289
7ZAH|1|2|G|290
7ZAH|1|2|A|291
7ZAH|1|2|U|292
7ZAH|1|2|C|293

Current chains

Chain 2

16S rRNA

Nearby chains

Chain J

30S ribosomal protein S8e

Chain N

30S ribosomal protein S12

Chain R

30S ribosomal protein S17