IL_7ZAH_090

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGCAUGG*UCAG(OMU)AUG

Length

15 nucleotides

Bulged bases

7ZAH|1|2|C|1019, 7ZAH|1|2|A|1175

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|U|1017
7ZAH|1|2|G|1018
7ZAH|1|2|C|1019
7ZAH|1|2|A|1020
7ZAH|1|2|U|1021
7ZAH|1|2|G|1022
7ZAH|1|2|G|1023
*
7ZAH|1|2|U|1173
7ZAH|1|2|C|1174
7ZAH|1|2|A|1175
7ZAH|1|2|G|1176
7ZAH|1|2|OMU|1177
7ZAH|1|2|A|1178
7ZAH|1|2|U|1179
7ZAH|1|2|G|1180

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 5

mRNA

Chain L

30S ribosomal protein S10

Chain P

30S ribosomal protein S14 type Z

Chain Z

30S ribosomal protein S3