IL_7ZAI_008

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

C(OMC)UACC*GAUGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|C|128
7ZAI|1|2|OMC|129
7ZAI|1|2|U|130
7ZAI|1|2|A|131
7ZAI|1|2|C|132
7ZAI|1|2|C|133
*
7ZAI|1|2|G|236
7ZAI|1|2|A|237
7ZAI|1|2|U|238
7ZAI|1|2|G|239
7ZAI|1|2|G|240

Current chains

Chain 2

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S4e

Chain J

30S ribosomal protein S8e