IL_7ZAI_049

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

ACUA*UCCCU

Length

9 nucleotides

Bulged bases

7ZAI|1|2|C|905, 7ZAI|1|2|U|906

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|A|904
7ZAI|1|2|C|905
7ZAI|1|2|U|906
7ZAI|1|2|A|907
*
7ZAI|1|2|U|1354
7ZAI|1|2|C|1355
7ZAI|1|2|C|1356
7ZAI|1|2|C|1357
7ZAI|1|2|U|1358

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain H

30S ribosomal protein S7

Chain K

30S ribosomal protein S9

Chain L

30S ribosomal protein S10

Chain X

30S ribosomal protein S28e