IL_7ZAI_065

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GACAAUG*CCUAAAC

Length

14 nucleotides

Bulged bases

7ZAI|1|2|U|1260

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|G|1221
7ZAI|1|2|A|1222
7ZAI|1|2|C|1223
7ZAI|1|2|A|1224
7ZAI|1|2|A|1225
7ZAI|1|2|U|1226
7ZAI|1|2|G|1227
*
7ZAI|1|2|C|1258
7ZAI|1|2|C|1259
7ZAI|1|2|U|1260
7ZAI|1|2|A|1261
7ZAI|1|2|A|1262
7ZAI|1|2|A|1263
7ZAI|1|2|C|1264

Current chains

Chain 2

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S7

Chain K

30S ribosomal protein S9

Chain L

30S ribosomal protein S10

Chain P

30S ribosomal protein S14 type Z

Chain U

30S ribosomal protein S19e