IL_7ZAI_085

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGAAAU*GCUCG

Length

11 nucleotides

Bulged bases

7ZAI|1|2|C|599

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|C|571
7ZAI|1|2|G|572
7ZAI|1|2|A|573
7ZAI|1|2|A|574
7ZAI|1|2|A|575
7ZAI|1|2|U|576
*
7ZAI|1|2|G|596
7ZAI|1|2|C|597
7ZAI|1|2|U|598
7ZAI|1|2|C|599
7ZAI|1|2|G|600

Current chains

Chain 2

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain E

30S ribosomal protein S4e

Chain I

30S ribosomal protein S8

Chain R

30S ribosomal protein S17