IL_7ZHG_049

3D structure

PDB id

7ZHG (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

ACUA*UCCCU

Length

9 nucleotides

Bulged bases

7ZHG|1|2|C|905, 7ZHG|1|2|U|906

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZHG|1|2|A|904
7ZHG|1|2|C|905
7ZHG|1|2|U|906
7ZHG|1|2|A|907
*
7ZHG|1|2|U|1354
7ZHG|1|2|C|1355
7ZHG|1|2|C|1356
7ZHG|1|2|C|1357
7ZHG|1|2|U|1358

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain H

30S ribosomal protein S7

Chain K

30S ribosomal protein S9

Chain L

30S ribosomal protein S10

Chain X

30S ribosomal protein S28e