IL_7ZHG_054

3D structure

PDB id

7ZHG (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GGAUGAAG*CGGAC

Length

13 nucleotides

Bulged bases

7ZHG|1|2|U|974

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZHG|1|2|G|971
7ZHG|1|2|G|972
7ZHG|1|2|A|973
7ZHG|1|2|U|974
7ZHG|1|2|G|975
7ZHG|1|2|A|976
7ZHG|1|2|A|977
7ZHG|1|2|G|978
*
7ZHG|1|2|C|998
7ZHG|1|2|G|999
7ZHG|1|2|G|1000
7ZHG|1|2|A|1001
7ZHG|1|2|C|1002

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 3

50S ribosomal protein L7Ae

Chain P

30S ribosomal protein S14 type Z

Chain Y

30S ribosomal protein S27ae