IL_7ZJX_014

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUCGUGG*CGGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|G|182
7ZJX|1|L5|C|183
7ZJX|1|L5|U|184
7ZJX|1|L5|C|185
7ZJX|1|L5|G|186
7ZJX|1|L5|U|187
7ZJX|1|L5|G|188
7ZJX|1|L5|G|189
*
7ZJX|1|L5|C|252
7ZJX|1|L5|G|253
7ZJX|1|L5|G|254
7ZJX|1|L5|C|255

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LF

60S ribosomal protein L4

Chain LO

60S ribosomal protein eL13

Chain Lk

60S ribosomal protein L35

Chain Lm

Ribosomal protein L37