IL_7ZJX_133

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCGGGCCCC*GCGGCCGGG

Length

18 nucleotides

Bulged bases

7ZJX|1|L5|C|3891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|C|3860
7ZJX|1|L5|C|3861
7ZJX|1|L5|G|3862
7ZJX|1|L5|G|3863
7ZJX|1|L5|G|3864
7ZJX|1|L5|C|3865
7ZJX|1|L5|C|3866
7ZJX|1|L5|C|3867
7ZJX|1|L5|C|3868
*
7ZJX|1|L5|G|3890
7ZJX|1|L5|C|3891
7ZJX|1|L5|G|3892
7ZJX|1|L5|G|3893
7ZJX|1|L5|C|3894
7ZJX|1|L5|C|3895
7ZJX|1|L5|G|3896
7ZJX|1|L5|G|3897
7ZJX|1|L5|G|3898

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein eL8

Chain Lc

60S ribosomal protein L27