IL_7ZJX_144

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

G(OMC)(PSU)C*G(PSU)G(A2M)GC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC, PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|G|4201
7ZJX|1|L5|OMC|4202
7ZJX|1|L5|PSU|4203
7ZJX|1|L5|C|4204
*
7ZJX|1|L5|G|4266
7ZJX|1|L5|PSU|4267
7ZJX|1|L5|G|4268
7ZJX|1|L5|A2M|4269
7ZJX|1|L5|G|4270
7ZJX|1|L5|C|4271

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein uL3

Chain LY

60S ribosomal protein L23