IL_7ZJX_199

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGAUAAC*GCUAA(OMU)A(OMC)A

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|U|144
7ZJX|1|S2|G|145
7ZJX|1|S2|G|146
7ZJX|1|S2|A|147
7ZJX|1|S2|U|148
7ZJX|1|S2|A|149
7ZJX|1|S2|A|150
7ZJX|1|S2|C|151
*
7ZJX|1|S2|G|167
7ZJX|1|S2|C|168
7ZJX|1|S2|U|169
7ZJX|1|S2|A|170
7ZJX|1|S2|A|171
7ZJX|1|S2|OMU|172
7ZJX|1|S2|A|173
7ZJX|1|S2|OMC|174
7ZJX|1|S2|A|175

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S6

Chain Sj

40S ribosomal protein S24