IL_7ZJX_211
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CGAGG(A2M)UC
- Length
- 11 nucleotides
- Bulged bases
- 7ZJX|1|S2|G|589
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_211 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1158
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7ZJX|1|S2|G|564
7ZJX|1|S2|A|565
7ZJX|1|S2|G|566
*
7ZJX|1|S2|C|586
7ZJX|1|S2|G|587
7ZJX|1|S2|A|588
7ZJX|1|S2|G|589
7ZJX|1|S2|G|590
7ZJX|1|S2|A2M|591
7ZJX|1|S2|U|592
7ZJX|1|S2|C|593
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S30
- Chain SU
- 40S ribosomal protein S9
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