IL_7ZJX_223

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

U(PSU)AC*GAA(PSU)AA

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|U|801
7ZJX|1|S2|PSU|802
7ZJX|1|S2|A|803
7ZJX|1|S2|C|804
*
7ZJX|1|S2|G|861
7ZJX|1|S2|A|862
7ZJX|1|S2|A|863
7ZJX|1|S2|PSU|864
7ZJX|1|S2|A|865
7ZJX|1|S2|A|866

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S7

Chain SW

40S ribosomal protein S11

Chain Sh

40S ribosomal protein S15a

Chain Si

40S ribosomal protein S23