IL_7ZJX_251

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

A(OMU)UG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|A|1288
7ZJX|1|S2|OMU|1289
7ZJX|1|S2|U|1290
7ZJX|1|S2|G|1291
*
7ZJX|1|S2|C|1310
7ZJX|1|S2|U|1311
7ZJX|1|S2|C|1312
7ZJX|1|S2|G|1313
7ZJX|1|S2|A|1314
7ZJX|1|S2|U|1315

Current chains

Chain S2

18S rRNA

Nearby chains

Chain B

Selenocysteine insertion sequence-binding protein 2

Chain SD

Ubiquitin carboxyl extension protein 80

Chain SH

40S ribosomal protein S29

Chain SV

S10_plectin domain-containing protein

Chain SX

40S ribosomal protein S12