IL_7ZJX_268
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAUCG*CAUGAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_268 not in the Motif Atlas
- Homologous match to IL_8C3A_469
- Geometric discrepancy: 0.091
- The information below is about IL_8C3A_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10092.1
- Basepair signature
- cWW-tSH-tSH-L-R-cWW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ZJX|1|S2|G|1605
7ZJX|1|S2|G|1606
7ZJX|1|S2|G|1607
7ZJX|1|S2|A|1608
7ZJX|1|S2|U|1609
7ZJX|1|S2|C|1610
7ZJX|1|S2|G|1611
*
7ZJX|1|S2|C|1630
7ZJX|1|S2|A|1631
7ZJX|1|S2|U|1632
7ZJX|1|S2|G|1633
7ZJX|1|S2|A|1634
7ZJX|1|S2|A|1635
7ZJX|1|S2|C|1636
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SQ
- Ribosomal protein S5
- Chain Sd
- 40S ribosomal protein S18
- Chain Se
- 40S Ribosomal protein eS19
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