IL_7ZJX_288
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CC(OMG)*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_288 not in the Motif Atlas
- Homologous match to IL_8P9A_255
- Geometric discrepancy: 0.0956
- The information below is about IL_8P9A_255
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
7ZJX|1|L5|C|1475
7ZJX|1|L5|C|1476
7ZJX|1|L5|OMG|1477
*
7ZJX|1|L5|C|1610
7ZJX|1|L5|U|1611
7ZJX|1|L5|G|1612
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4
- Chain Ld
- 60S ribosomal protein L27a
Coloring options: