IL_7ZJX_330

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACGGCC*GAAUGUUU

Length

15 nucleotides

Bulged bases

7ZJX|1|S2|U|1017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|G|926
7ZJX|1|S2|A|927
7ZJX|1|S2|C|928
7ZJX|1|S2|G|929
7ZJX|1|S2|G|930
7ZJX|1|S2|C|931
7ZJX|1|S2|C|932
*
7ZJX|1|S2|G|1011
7ZJX|1|S2|A|1012
7ZJX|1|S2|A|1013
7ZJX|1|S2|U|1014
7ZJX|1|S2|G|1015
7ZJX|1|S2|U|1016
7ZJX|1|S2|U|1017
7ZJX|1|S2|U|1018

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Lf

60S ribosomal protein L30

Chain SB

40S ribosomal protein S27

Chain SM

40S ribosomal protein S3a

Chain SY

40S ribosomal protein S13