IL_7ZJX_338

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

7ZJX|1|S2|G|1498

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|U|1334
7ZJX|1|S2|G|1335
*
7ZJX|1|S2|U|1497
7ZJX|1|S2|G|1498
7ZJX|1|S2|A|1499

Current chains

Chain S2

18S rRNA

Nearby chains

Chain I

Cripavirus internal ribosome entry site (IRES); CrPV IRES

Chain SH

40S ribosomal protein S29

Chain SO

40S ribosomal protein S3

Chain SV

S10_plectin domain-containing protein

Chain Sf

40S ribosomal protein S20